PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_37971.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bHLH
Protein Properties Length: 290aa    MW: 31182.1 Da    PI: 8.4359
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_37971.3genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.80.000221792161254
                   HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
           HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   R +++ +++  L++l+ +      +K + a++L +A eYIk L
  MLOC_37971.3 179 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEANEYIKFL 216
                   677888999*******998.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.874167216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.4E-10177227IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.51E-4177221No hitNo description
Gene3DG3DSA:4.10.280.101.6E-7177225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    Send to blast
MPASMTTRPL FRAQQPAVDE AVMSNPFRDM SHSFSLLEHV PAASSPYGTA PLQAMFDSTG  60
ASHNVSVLGE CRSSTSYDGT AAMQLNQAAT QMLGGGAQLQ YLSGSGSYLP FGGAPLSSQL  120
LLQALQPKTS YSSSSNTLMA KSAEHACSPP ARKSEPDSPA AAKRPRIEAP SPLPTFKVRK  180
EKLGDRITAL QQLVSPFGKT DTASVLHEAN EYIKFLHDQV ASLTYPYLKN VNPLQQFQQK  240
GSENAKDDGG EPKKDLRSRG LCLVPVATTY TVASDSVPEF WYPTFGGTFR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003567189.11e-132PREDICTED: transcription factor bHLH123
SwissprotQ8GXT35e-45BH123_ARATH; Transcription factor bHLH123
TrEMBLM0VWQ20.0M0VWQ2_HORVD; Uncharacterized protein
TrEMBLM0VWQ30.0M0VWQ3_HORVD; Uncharacterized protein
STRINGMLOC_37971.20.0(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.12e-46bHLH family protein